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How many sirtuin genes are out there? evolution of sirtuin genes in vertebrates with a description of a new family memberuse asterix (*) to get italics
Juan C. Opazo, Michael W. Vandewege, Federico G. Hoffmann, Kattina Zavala, Catalina Meléndez, Charlotte Luchsinger, Viviana A. Cavieres, Luis Vargas-Chacoff, Francisco J. Morera, Patricia V. Burgos, Cheril Tapia-Rojas, Gonzalo A. MardonesPlease use the format "First name initials family name" as in "Marie S. Curie, Niels H. D. Bohr, Albert Einstein, John R. R. Tolkien, Donna T. Strickland"
2022
<p style="text-align: justify;">Studying the evolutionary history of gene families is a challenging and exciting task with a wide range of implications. In addition to exploring fundamental questions about the origin and evolution of genes, disentangling their evolution is also critical to those who do functional/structural studies to allow a deeper and more precise interpretation of their results in an evolutionary context. The sirtuin gene family is a group of genes that are involved in a variety of biological functions mostly related to aging. Their duplicative history is an open question, as well as the definition of the repertoire of sirtuin genes among vertebrates. Our results show a well-resolved phylogeny that represents an improvement in our understanding of the duplicative history of the sirtuin gene family. We identified a new sirtuin gene family member (SIRT8) that was apparently lost in the last common ancestor of amniotes, but retained in all other groups of jawed vertebrates. According to our experimental analyses, elephant shark SIRT8 protein is located in mitochondria, the overexpression of which leads to an increase in cellular levels of ATP. Moreover, in vitro analysis demonstrated it has deacetylase activity being modulated in a similar way to mammalian SIRT3. Our results indicate that there are at least eight sirtuin paralogs among vertebrates and that all of them can be traced back to the last common ancestor of the group that existed between 676 and 615 millions of years ago.</p>
https://zenodo.org/record/3951138#.YvaTb-zMI-QYou should fill this box only if you chose 'All or part of the results presented in this preprint are based on data'. URL must start with http:// or https://
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aging, deacetylase, gene family evolution, gene duplication, mitochondria, SIRT.
NonePlease indicate the methods that may require specialised expertise during the peer review process (use a comma to separate various required expertises).
Molecular Evolution
Rosa Fernandez [rosa.fernandez@ibe.upf-csic.es], Ricard Albalat [ralbalat@ub.edu], Cristian Cañestro [canestro@ub.edu], Filipe Castro [filipe.castro@ciimar.up.pt], Aurora Ruiz-Herrera Moreno [aurora.ruizherrera@uab.cat] No need for them to be recommenders of PCIEvolBiol. Please do not suggest reviewers for whom there might be a conflict of interest. Reviewers are not allowed to review preprints written by close colleagues (with whom they have published in the last four years, with whom they have received joint funding in the last four years, or with whom they are currently writing a manuscript, or submitting a grant proposal), or by family members, friends, or anyone for whom bias might affect the nature of the review - see the code of conduct
e.g. John Doe [john@doe.com]
2022-05-12 16:06:04
Frédéric Delsuc
Filipe Castro, Anonymous, Nicolas Leurs